{"id":874,"date":"2020-06-08T01:48:51","date_gmt":"2020-06-07T23:48:51","guid":{"rendered":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/?p=874"},"modified":"2020-06-08T01:56:38","modified_gmt":"2020-06-07T23:56:38","slug":"new-paper-an-r-package-for-visualizing-plastome-coverage-depth","status":"publish","type":"post","link":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/2020\/06\/08\/new-paper-an-r-package-for-visualizing-plastome-coverage-depth\/","title":{"rendered":"New Paper &#8211; An R package for visualizing plastome coverage depth"},"content":{"rendered":"<p><strong>Visualizing the depth<\/strong><\/p>\n<p>I just published <a href=\"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/s12859-020-3475-0\" target=\"_blank\" rel=\"noopener\">a new paper<\/a> on an R package that assists users in visualizing the coverage depth of a plastid genome in relation to its circular, quadripartite genome structure. Co-author of the software is an <a href=\"https:\/\/github.com\/nilsj9\" rel=\"noopener\" target=\"_blank\">undergraduate student<\/a>, who (as part of his bachelor thesis) designed the visualization engine of the software.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Visualizing the depth I just published a new paper on an R package that assists users in visualizing the coverage depth of a plastid genome in relation to its circular, quadripartite genome structure. Co-author of the software is an undergraduate student, who (as part of his bachelor thesis) designed the visualization engine of the software.<\/p>\n","protected":false},"author":2306,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[9],"tags":[],"class_list":["post-874","post","type-post","status-publish","format-standard","hentry","category-allgemein"],"_links":{"self":[{"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/posts\/874","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/users\/2306"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/comments?post=874"}],"version-history":[{"count":3,"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/posts\/874\/revisions"}],"predecessor-version":[{"id":877,"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/posts\/874\/revisions\/877"}],"wp:attachment":[{"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/media?parent=874"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/categories?post=874"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/blogs.fu-berlin.de\/gruenstaeudl\/wp-json\/wp\/v2\/tags?post=874"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}