Michael Grünstäudl (Gruenstaeudl), PhD

Researcher at the Freie Universität Berlin

Monatsarchiv für Juni 2018

New paper – Bioinformatic Workflows for Generating Complete Plastid Genome Sequences

In science, standardization and repeatability is a must. Together with two other scientists, I just published a new paper on bioinformatic workflows for generating complete plastid genome sequences in the context of plastid phylogenomics of the water-lily clade. We demonstrate that standardization and repeatability are essential elements for modern plant phylogenomics and how such standardization […]

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One-liner: Splitting multi-sequence FASTA into single-sequence FASTA

Quick, split it! There are one-liners that never get old. Here is another one of them. $ csplit multisequence.fasta /\>/ {*} && find . -size 0 -print0 |xargs -0 rm —

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Teaching in spring 2018 – Part II

                           

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