Michael Grünstäudl (Gruenstaeudl), PhD

Postdoctoral Researcher at the Freie Universität Berlin

Monatsarchiv für June 2018

New paper – Bioinformatic Workflows for Generating Complete Plastid Genome Sequences

In science, standardization and repeatability is a must. Together with two other scientists, I just published a new paper on bioinformatic workflows for generating complete plastid genome sequences in the context of plastid phylogenomics of the water-lily clade. We demonstrate that standardization and repeatability are essential elements for modern plant phylogenomics and how such standardization […]

Weiter lesen...

One-liner: Splitting multi-sequence FASTA into single-sequence FASTA

Quick, split it! There are one-liners that never get old. Here is another one of them. $ csplit multisequence.fasta /\>/ {*} && find . -size 0 -print0 |xargs -0 rm —

Weiter lesen...

Teaching in spring 2018 – Part II


Weiter lesen...